PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000382.1_g000008.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 131aa MW: 14993.1 Da PI: 9.2931 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 40.8 | 7.5e-13 | 56 | 116 | 1 | 59 |
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetr 59 +fYn+YAk +GF+vr ++++ s + +g +t+ ++vCs +gkr+ee + +++ +++++etr Rmu_sc0000382.1_g000008.1 56 SFYNAYAKAMGFDVRSDYKRLSiRITGIVTSLRLVCSAQGKRREEYMSnKKRVHKPKKETR 116 5******************999999*******************99982233334555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 131 aa Download sequence |
MDGSYEPSIS DIGLVSQSSI NGSDCNEMQY KGVRYDKLST EDLKGQEFKT VEEAESFYNA 60 YAKAMGFDVR SDYKRLSIRI TGIVTSLRLV CSAQGKRREE YMSNKKRVHK PKKETRFNYL 120 PTVMVNLILL V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18960.1 | 6e-09 | FAR1 family protein |