PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000367.1_g000138.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 350aa    MW: 39209 Da    PI: 5.3778
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000367.1_g000138.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76e-18128178256
                        AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                +++GVr+++ +g+W+ eIrd +     r  r++lg+f taeeAa  +++a+ +l+g+
  Rmu_sc0000367.1_g000138.1 128 KFQGVRQRP-WGKWATEIRDpV-----RkSRVWLGTFQTAEEAAMVYDRAAIQLRGH 178
                                89*******.**********44.....55**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MNAGDLARYL ALELVRSAKR LGWLFGEKNC CEWQSRNSGG GRMRCVGAID AEIQFMRRRS  60
IPKIVRIFVT DEDATDTSSD EEEQDQQQRL TKRVINEVRI EEESEAVRVF LAKNQKQKPK  120
PLQKEKRKFQ GVRQRPWGKW ATEIRDPVRK SRVWLGTFQT AEEAAMVYDR AAIQLRGHNA  180
LANIIAPPSK ILIPDHDSSS NESSSINNLS CSNASSSNYH IVVIDEYDSG KECQNIRSTT  240
SVLSGSENEW RPGSKEQDET HFVKDYGYFD GVISPTEAIF FGVTEPILLE EMNLVPETML  300
VTSNSKTQLL NLEQNMFSGG GMGVQLEGKG GVGSEGVSVE VRTAALEARE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46310.15e-27ERF family protein