PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000367.1_g000033.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 114aa MW: 12600.2 Da PI: 4.668 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 32.9 | 2.2e-10 | 8 | 55 | 43 | 83 |
TCP 43 kdsktieWLlqqakpaikeltgtssssasec.......eaesssssas 83 +d++tieWLl+qa+p+i + tg++ ++++ ++++++s++ Rmu_sc0000367.1_g000033.1 8 TDGQTIEWLLKQAEPSILAVTGNGVTPSNTLstlasvnLQVEKVVSED 55 69*********************9999977742222233333333333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MKNFLSVTDG QTIEWLLKQA EPSILAVTGN GVTPSNTLST LASVNLQVEK VVSEDKNFVR 60 KKCTTGGQPL PPPYDHYLKI ITKNYGIEFS VNDVAIDVGI ETQEEFKEKD GKQD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 1e-10 | TCP family protein |