PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000341.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 324aa MW: 35931.1 Da PI: 8.9073 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 94.5 | 7.5e-30 | 170 | 229 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+ Rmu_sc0000341.1_g000003.1 170 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSVEDQSILVATYEGEHNHP 229 58***************************99****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MDYSSAAAYD TSLDLNTRPL RLFDDSPPIK KEVQSKILSD FGRELSAKEE SGALVEELHR 60 VSTENKKLTE MLTVMGESYN ALRSQLLEYM SKNPEKELSP ISKKRKSESS NNNNNNNSAN 120 NILNGMNNGN SESSSSDGES CKKPREETIK AKIYRSYVRT EPSDTTSLVV KDGYQWRKYG 180 QKVTRDNPCP RAYFKCSFAP TCPVKKKVQR SVEDQSILVA TYEGEHNHPN PSQLEASSGS 240 NRCMTLGSVP CSTSLGTSGP TITLDLTKSK SNTSDTKSPK PRTETPEVRK LLVEQMASSL 300 TKDPNFTKAL AAAISGRFLQ HDTY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80840.1 | 8e-91 | WRKY family protein |