PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000341.1_g000003.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 324aa    MW: 35931.1 Da    PI: 8.9073
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000341.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.57.5e-30170229159
                                ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+
  Rmu_sc0000341.1_g000003.1 170 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApTCPVKKKVQRSVEDQSILVATYEGEHNHP 229
                                58***************************99****************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MDYSSAAAYD TSLDLNTRPL RLFDDSPPIK KEVQSKILSD FGRELSAKEE SGALVEELHR  60
VSTENKKLTE MLTVMGESYN ALRSQLLEYM SKNPEKELSP ISKKRKSESS NNNNNNNSAN  120
NILNGMNNGN SESSSSDGES CKKPREETIK AKIYRSYVRT EPSDTTSLVV KDGYQWRKYG  180
QKVTRDNPCP RAYFKCSFAP TCPVKKKVQR SVEDQSILVA TYEGEHNHPN PSQLEASSGS  240
NRCMTLGSVP CSTSLGTSGP TITLDLTKSK SNTSDTKSPK PRTETPEVRK LLVEQMASSL  300
TKDPNFTKAL AAAISGRFLQ HDTY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.18e-91WRKY family protein