PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000330.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 298aa    MW: 32924.2 Da    PI: 6.2506
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000330.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.12.1e-184695255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                               ++ GVr+++ +grWvAeI+d +   ++ r +lg+f taeeAa+a+++a+  l+g
  Rmu_sc0000330.1_g000004.1 46 KFVGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 95
                               799******.7*********32...35**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MEFQFQLQKQ ISFPAAAQSH RASGIPKSSK GNKLKGGRNR SNNTNKFVGV RQRPSGRWVA  60
EIKDTTQKIR MWLGTFETAE EAARAYDEAA CLLRGNNTRT NFITHVSLDS PLASRIQNLL  120
NTKKPGSNCE QQIQMTSSTS SSTASHPPTA KSTSSTSTSA SSTSKSCLSS EVSNQESSHH  180
QFSDDVYKPD LSNCNQLPFD QLSTSTTTNS YQPNISWVDG FSFAQQMFAT PKDEAALSSE  240
LTSADERGDS DELLEFERMK VERQISASLY AMNGVQEYMD TVHDANEALW DLQPFCAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-28ERF family protein