PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000324.1_g000023.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 224aa MW: 24876.9 Da PI: 7.8594 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 82.6 | 1e-25 | 101 | 186 | 2 | 78 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt........ssssasec.eae 76 + +kdrhsk++T++g++d l a++a +f+d+qd+LG+d++s +++WL+++ak+ i+el + ++ss++ + +a+ Rmu_sc0000324.1_g000023.1 101 TYRKDRHSKVCTAKGPKDHPAWLAAHTANQFYDVQDRLGYDRPSMAVDWLIKKAKAVIDELSSWnpnsisvqTTSSSNVSiSAA 184 679**********************************************************99954444442222221112222 PP TCP 77 ss 78 ++ Rmu_sc0000324.1_g000023.1 185 QE 186 22 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MGSPRSDQPK PPHRGHLVHL GMLVRFLGSS STNSRSWWRI KEEINPVART GRPDRNSYFW 60 ADMLKVSVQF NPENVIVSIR IASSSTASEI VEARDHILRA TYRKDRHSKV CTAKGPKDHP 120 AWLAAHTANQ FYDVQDRLGY DRPSMAVDWL IKKAKAVIDE LSSWNPNSIS VQTTSSSNVS 180 ISAAQETQNV SLHFSMVEAP SEDGVEVVLH VGNYGEDGGV GLEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 6e-33 | TCP family protein |