PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000308.1_g000038.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 509aa MW: 59628.5 Da PI: 7.6894

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000308.1_g000038.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.7	1e-19	34	117	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 fYn+Y ke+GFs+r ++s ++k+n++ +++++vC+k+g+++ + +k ++ ++gCka++ v ++++g++ ++ ++++ Rmu_sc0000308.1_g000038.1 34 FYNRYTKEAGFSIRSHSSATNKDNTQLMRKEYVCYKQGTSKVQGEK-----CKKGLPQVGCKARIAVVRKESGRYAISVFVEDQ 112 *************************************9998877.....89999************************ PP FAR1 86 nHela 90 nH+l+ Rmu_sc0000308.1_g000038.1 113 NHPLT 117 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
MESEDDQVYI PQVKAELMPK LHQEFETIDE VATFYNRYTK EAGFSIRSHS SATNKDNTQL 60 MRKEYVCYKQ GTSKVQGEKC KKGLPQVGCK ARIAVVRKES GRYAISVFVE DQNHPLTSPP 120 RGNLLRSHHR VSKVNTVLSQ QLSLVNVQKH KQFEFFGVQV GGIENIGCTQ RDLYNYGRSC 180 CQEKKGHGGD LLYMHFQNEK EKDSSSIYIM ESDEENRVTR CFWADSISRR AYNFYGDVVI 240 FDTTYNTNRY GMIFAPFTGV NNHGQTIIFA SAFLNDETTN SFVWLFKEFL KGMPGNAPEN 300 APKMIITDKD PAMTKAILEA LPLTFHRYCS WHILNKFSEK LDAIKYRDYY QDFYSCIWNS 360 SSREEFDSRW TEIIEKSGLS DNKWLQSIYE IRSSWIPAHF ERGLLHQRYY ELEKDHINID 420 EKARTVMSLY IEDHMAKIYA RKIFYEVQEQ LRESFKYKLE LLRENVTHCV FKVMRKNLDT 480 MKSRELTYEK DSDFASCNCR KFESEGLSC

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

MESEDDQVYI PQVKAELMPK LHQEFETIDE VATFYNRYTK EAGFSIRSHS SATNKDNTQL  60
MRKEYVCYKQ GTSKVQGEKC KKGLPQVGCK ARIAVVRKES GRYAISVFVE DQNHPLTSPP  120
RGNLLRSHHR VSKVNTVLSQ QLSLVNVQKH KQFEFFGVQV GGIENIGCTQ RDLYNYGRSC  180
CQEKKGHGGD LLYMHFQNEK EKDSSSIYIM ESDEENRVTR CFWADSISRR AYNFYGDVVI  240
FDTTYNTNRY GMIFAPFTGV NNHGQTIIFA SAFLNDETTN SFVWLFKEFL KGMPGNAPEN  300
APKMIITDKD PAMTKAILEA LPLTFHRYCS WHILNKFSEK LDAIKYRDYY QDFYSCIWNS  360
SSREEFDSRW TEIIEKSGLS DNKWLQSIYE IRSSWIPAHF ERGLLHQRYY ELEKDHINID  420
EKARTVMSLY IEDHMAKIYA RKIFYEVQEQ LRESFKYKLE LLRENVTHCV FKVMRKNLDT  480
MKSRELTYEK DSDFASCNCR KFESEGLSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-78	FAR1 family protein