PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000283.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 245aa MW: 28498.9 Da PI: 6.7153

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000283.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.9	2.6e-26	69	159	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 +fY +Y++++GF+vr++++++s++n+ ++ ++fvCskeg+r+++ +++ + ++tr gC a+l+v +++ +kw+vtk+++ Rmu_sc0000283.1_g000004.1 69 EFYIAYGRHTGFTVRIHHNRRSRMNNMVIGQDFVCSKEGFRDKKYVYrDNRVLPPPPVTREGCAAMLRVALRDGEKWVVTKFVK 152 6****************************************99882333344899*********************** PP FAR1 84 eHnHela 90 eHnH+l+ Rmu_sc0000283.1_g000004.1 153 EHNHTLM 159 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MESESNNNNN NNPFDSDESQ SCELPNDIDL CSGEVDKIIE LSNGRSHLMG NPIEPYIGME 60 FKSRDTAREF YIAYGRHTGF TVRIHHNRRS RMNNMVIGQD FVCSKEGFRD KKYVYRDNRV 120 LPPPPVTREG CAAMLRVALR DGEKWVVTKF VKEHNHTLMS PSKVPWRGSG KTLINEDEKD 180 RKIRELTIEL SNERQRCKRK CAAYQDQLNR LLKDVQDHSD HLSERVQDIV KNIRELESEQ 240 SEDSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	194	199	RQRCKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	2e-42	FAR1 family protein