PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000265.1_g000017.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GeBP
Protein Properties Length: 323aa    MW: 36615.2 Da    PI: 5.6304
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000265.1_g000017.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57397.11.7e-30137227297
                     DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehd 85 
                                lfqr+wseeDei+lL+G+ ++++++  +ps+d++af +f+k++++++vsksql +Kirr+KkKf++ v++     + + +++h+
  Rmu_sc0000265.1_g000017.1 137 LFQRVWSEEDEIILLKGMNEYTMEKRLDPSADVNAFLNFIKGKLKLNVSKSQLQDKIRRMKKKFENIVNN-----KYKPTNPHE 215
                                79*******************************************************************9.....78899**** PP

                     DUF573  86 qkifelskkiWg 97 
                                  +felsk +Wg
  Rmu_sc0000265.1_g000017.1 216 WAAFELSKNVWG 227
                                ***********8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MAPKRPSNAM NNPQSSSEEE DEEPSSEEYK TASESDSETE SESESGSVGE TGVANAKPIA  60
SKHVEKVTPP PKATKPSASQ AKPGTKRLGG ESELIKDSKK AKKKKGNDEE DLKKAKKKGI  120
DKEDDGVEEE LEKPKQLFQR VWSEEDEIIL LKGMNEYTME KRLDPSADVN AFLNFIKGKL  180
KLNVSKSQLQ DKIRRMKKKF ENIVNNKYKP TNPHEWAAFE LSKNVWGDGE DLDGKVEQLK  240
SNGNSQNMLR EVLWFDKGFK ELRLSETIVN QGLEWIEESN CAELLKDRWN KLHVAELEHF  300
VMKAELMRDQ AKLILEALKS SNH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102122KKKKGNDEEDLKKAKKKGIDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.12e-22GeBP family protein