PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000265.1_g000017.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | GeBP | ||||||||
Protein Properties | Length: 323aa MW: 36615.2 Da PI: 5.6304 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 97.1 | 1.7e-30 | 137 | 227 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehd 85 lfqr+wseeDei+lL+G+ ++++++ +ps+d++af +f+k++++++vsksql +Kirr+KkKf++ v++ + + +++h+ Rmu_sc0000265.1_g000017.1 137 LFQRVWSEEDEIILLKGMNEYTMEKRLDPSADVNAFLNFIKGKLKLNVSKSQLQDKIRRMKKKFENIVNN-----KYKPTNPHE 215 79*******************************************************************9.....78899**** PP DUF573 86 qkifelskkiWg 97 +felsk +Wg Rmu_sc0000265.1_g000017.1 216 WAAFELSKNVWG 227 ***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MAPKRPSNAM NNPQSSSEEE DEEPSSEEYK TASESDSETE SESESGSVGE TGVANAKPIA 60 SKHVEKVTPP PKATKPSASQ AKPGTKRLGG ESELIKDSKK AKKKKGNDEE DLKKAKKKGI 120 DKEDDGVEEE LEKPKQLFQR VWSEEDEIIL LKGMNEYTME KRLDPSADVN AFLNFIKGKL 180 KLNVSKSQLQ DKIRRMKKKF ENIVNNKYKP TNPHEWAAFE LSKNVWGDGE DLDGKVEQLK 240 SNGNSQNMLR EVLWFDKGFK ELRLSETIVN QGLEWIEESN CAELLKDRWN KLHVAELEHF 300 VMKAELMRDQ AKLILEALKS SNH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 102 | 122 | KKKKGNDEEDLKKAKKKGIDK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00390.1 | 2e-22 | GeBP family protein |