PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0000114.1_g000020.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 261aa MW: 30395.7 Da PI: 9.2954

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0000114.1_g000020.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	67.2	4.2e-21	68	154	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 fY +YA+ +GF +r+ +sk+s+ ++e+++++f C+++g++ e + +e+r r + r +Cka++ v ++k+g ++v+ +++ H Rmu_sc0000114.1_g000020.1 68 FYTKYAYAAGFVIRIGSSKRSRATNEFIRKEFFCNRQGNSPIELTG--DEKRIRGVVRKDCKARMIVVRDKSGGFVVNIFDEAH 149 9************************************9998877..99999*************************** PP FAR1 86 nHela 90 +H+++ Rmu_sc0000114.1_g000020.1 150 THPMT 154 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MTDNKMVVPA EMETNGIIVP AEMETEPIQA IPPSKENVST SAFYPQVRNE LKPFKGQQFK 60 TWEEAHVFYT KYAYAAGFVI RIGSSKRSRA TNEFIRKEFF CNRQGNSPIE LTGDEKRIRG 120 VVRKDCKARM IVVRDKSGGF VVNIFDEAHT HPMTSPKRPH LLKFNRRLTK AQRSLWEQLS 180 MVNIPTHQQF DILRVQAGEF QYIGCTQQDL YNLEKDKRKE TKGHDGEMLH DYFLPEQEKN 240 YGFFFTIKAD FENRITHCFL G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	5e-22	FAR1 family protein