PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0000109.1_g000019.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | Dof | ||||||||
Protein Properties | Length: 173aa MW: 19482.2 Da PI: 9.1091 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.7 | 6.1e-39 | 54 | 112 | 2 | 60 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +ek+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k Rmu_sc0000109.1_g000019.1 54 PEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKP 112 68999***************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence |
MAEVSSGQDV PGIKLFGTTI TLQNKQVVLK DDHHHRQPKK ADDVHDQTVE MKRPEKIIPC 60 PRCKSMETKF CYFNNYNVNQ PRHFCKGCQR YWTAGGALRN VPVGAGRRKT KPPGRELAGF 120 PEGCLYDASE VVQQFELDGV VEEWHVAAVQ GDFRHVFPVV KRRRSGSGGQ TCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29160.1 | 2e-61 | Dof family protein |