PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000077.1_g000044.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 245aa    MW: 27569.8 Da    PI: 6.518
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000077.1_g000044.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.61.1e-0978133248
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..........t 48 
                                fY  Y+  +GFs rk+k  ++   + +++r++vCskeg+r+++ k           +
  Rmu_sc0000077.1_g000044.1  78 FYAYYSLAMGFSFRKEKLCRN-AAQVVVRRQLVCSKEGERKKRGKLdpsfaseiisS 133
                                9******************99.7777****************998766666655553 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MDESGMRFNE PNYHGWSVDE DDFSDEYEEL FSDEEASQSA NMDENLDCLH FNGKKYEDFQ  60
SSDMIGVEFS SVKAVDTFYA YYSLAMGFSF RKEKLCRNAA QVVVRRQLVC SKEGERKKRG  120
KLDPSFASEI ISSAQNLSPP HGTKQVCKRK TVNQKPIVED ADTRSMKRSG KQFGDGEHEK  180
KGSALHKEIL PKVIVKPVSQ HADARKVVSS VWSNSSPNIT TTLLQQSLFP SSDPTARFGT  240
MTLLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.19e-07FAR1 family protein