PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000063.1_g000026.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 377aa    MW: 40964.5 Da    PI: 6.6317
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000063.1_g000026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.3e-20179228255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  Rmu_sc0000063.1_g000026.1 179 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 228
                                59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    
MAAMDIYSSS PLQSSSDPFT GELMEALEPF MKSASPPPPC SSYSPSSFDF NPSIPTPSSS  60
YSSSSASTPF LSSTSSPSSS YNYLSFSPSI PTPQPNLYQD GGSTFSLGFE QQGSIGLNHL  120
TPSQIHQIQA EIQLQNQPQM MAWQQNYQQQ SSPSHTLSFL SPKPVPMKQS GSPPKPTKLY  180
RGVRQRHWGK WVAEIRLPKN RTRLWLGTFD TAEEAALAYD KAAYKLRGDF ARLNFPHLKH  240
TGSVVGGEFG EYKPLHSSVD AKLQAICEGL AESQKQGKAG KQAGVAKKSS AARSQQKPKS  300
TPVPEPEALT VKMESSSLSP VMTDSDGSAG SSPLSDLTFA DYSESSSPWE NCGTESYMLE  360
KYPSEIDWAS ILNQNSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.18e-70ERF family protein