PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0000061.1_g000025.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 229aa    MW: 24323.6 Da    PI: 9.8941
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0000061.1_g000025.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.71.8e-31157214359
                                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h 
  Rmu_sc0000061.1_g000025.1 157 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 214
                                9************************9888****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
LSLAPAPVAS PAIAPPAPVK APETNFAHSM TLDFTRPNAL ASNPKCTDIE FSVSSSSSFM  60
SSAITGDNSV SNGKLGLFIA PNPAPAVSGA KPPLSAAPFK KRCHEHDRSD DVSCKLSGSG  120
SASGSGKCHC SKRRKNRVKK TIRVPAISSK IADIPPDEYS WRKYGQKPIK GSPYPRGYYK  180
CSTVRGCPAR KHVERAPDDP AMLIVTYEGE HRHAPDNMSG GVGMVFEST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24570.12e-69WRKY family protein