PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8519545.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 322aa    MW: 35104.5 Da    PI: 6.6477
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8519545.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.97.5e-32146203259
                                --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                +Dgy+WrKYGqK vk+s++prsYYrCt ++C+vkk+vers+edp++v++tYeg+H h+
  Rmu_co8519545.1_g000001.1 146 EDGYRWRKYGQKAVKNSPYPRSYYRCTNSKCTVKKRVERSSEDPTTVITTYEGQHCHH 203
                                8******************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDGDKDTRDP GLTDFPTEPS WDSPYFFSND RDTTVLSEFG WNFSPDDQIG ADDRSDLAGS  60
STTTTLAEQF PERSSNTNSD PAPVVGSVSS SSTEDPPERS TGSGSGGTPP PETPSSTTKV  120
NKKKGQKRIR QPRFAFMTKS EVDHLEDGYR WRKYGQKAVK NSPYPRSYYR CTNSKCTVKK  180
RVERSSEDPT TVITTYEGQH CHHTVAFPRG GGGVNIISHD QSGFAAGSQL MQLPPVSQFM  240
HYPTSIQPRS QISPTHNLTV GGSQSHRLVR AGGTHYHHDQ AAGGSQCIIN PNHEPLPVVP  300
VPTDEGLLGD IVPPGMRNPF DG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69310.24e-62WRKY family protein