PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8499509.1_g000001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 287aa    MW: 32515.3 Da    PI: 5.7571
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8499509.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.9e-202978255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                y+GVr++  +g+WvAeIr+p++   r+r +lg+f taeeAa a+++a+++l+g
  Rmu_co8499509.1_g000001.1 29 EYRGVRQRT-WGKWVAEIREPKK---RTRLWLGSFATAEEAAMAYDEAARRLYG 78
                               69****999.**********965...5*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MENCRKSPLK PWKKGPTRGK GGPQNASCEY RGVRQRTWGK WVAEIREPKK RTRLWLGSFA  60
TAEEAAMAYD EAARRLYGPD AFLNLPHLQP NSSNPSLKSQ KFKWFPSQNF ISMFPPCGML  120
NINAQPSVHV IHQRLQELKQ NGVYGQTTPS SSSSSCDSKP EAHTTMDKTP KENVAENKEK  180
DVEITLEKVV GGREEKPQID LNEFLQQLGV LKRERQSEES DTTTSFAAPE SSITETSDEF  240
GPFADKNFNW DALIEMHAME DQGAEAGTFQ VYDVNEELYF PTSIWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57600.13e-84ERF family protein