PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8499245.1_g000002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 355aa    MW: 40714.4 Da    PI: 8.1585
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8499245.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY81.86.8e-26280340259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                dDg++WrKYGqKe+ gs++pr+YYrCt++   gC+++k+v+r +++p +  +tY+g+H+++
  Rmu_co8499245.1_g000002.1 280 DDGHAWRKYGQKEILGSRYPRNYYRCTYRmdqGCMATKHVQRISDEPVLYRTTYRGNHTCR 340
                                8***************************99999**************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MSLPGSEIPH WFNHQCKGFL VNVQLPPNWF DDKFLGFAIC GVSNFKGAHN DASDLSAVCF  60
CTFKGNHGEY KFSFHLLDWG FRTNRFLQSD HMFLGYVPWS QYRFSDGGKP VNERYYTEAT  120
FEILVENGVY AHDDYRTVIR RHCITSCGVR LFHGNYMELQ NLSITQPNSH HDSSEILLDT  180
ARKRKREIAA GVTMQWKWPP AEEQEGSLSR EGSLVGEGSS AGNRSSAGEG VLSILSSVAT  240
VESGANERDG PTIPNRTNRR RRTNLRNSAT WIRDTNQLID DGHAWRKYGQ KEILGSRYPR  300
NYYRCTYRMD QGCMATKHVQ RISDEPVLYR TTYRGNHTCR PVSSTQDIEE FYLAY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.14e-24WRKY family protein