PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8499245.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 355aa MW: 40714.4 Da PI: 8.1585 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 81.8 | 6.8e-26 | 280 | 340 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqKe+ gs++pr+YYrCt++ gC+++k+v+r +++p + +tY+g+H+++ Rmu_co8499245.1_g000002.1 280 DDGHAWRKYGQKEILGSRYPRNYYRCTYRmdqGCMATKHVQRISDEPVLYRTTYRGNHTCR 340 8***************************99999**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 355 aa Download sequence |
MSLPGSEIPH WFNHQCKGFL VNVQLPPNWF DDKFLGFAIC GVSNFKGAHN DASDLSAVCF 60 CTFKGNHGEY KFSFHLLDWG FRTNRFLQSD HMFLGYVPWS QYRFSDGGKP VNERYYTEAT 120 FEILVENGVY AHDDYRTVIR RHCITSCGVR LFHGNYMELQ NLSITQPNSH HDSSEILLDT 180 ARKRKREIAA GVTMQWKWPP AEEQEGSLSR EGSLVGEGSS AGNRSSAGEG VLSILSSVAT 240 VESGANERDG PTIPNRTNRR RRTNLRNSAT WIRDTNQLID DGHAWRKYGQ KEILGSRYPR 300 NYYRCTYRMD QGCMATKHVQ RISDEPVLYR TTYRGNHTCR PVSSTQDIEE FYLAY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46400.1 | 4e-24 | WRKY family protein |