PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8487513.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 26103.8 Da PI: 5.3942 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.5 | 3.4e-18 | 87 | 137 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdp++ng r++lg++ tae+A a+++a+ k++g Rmu_co8487513.1_g000001.1 87 HFRGVRRRP-WGKYAAEIRDPKKNG--MRVWLGTYETAEDAGLAYDRAAFKMRG 137 69*******.***********9998..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MSIETQSFSN SDWRALLESI RQHLLDDDFD TQLGFFADSP AQRTSSSNST EISNSDAEIV 60 GRNQAFTSEF EEEVAERKHH APSAPRHFRG VRRRPWGKYA AEIRDPKKNG MRVWLGTYET 120 AEDAGLAYDR AAFKMRGSKA KLNFPHLIGT HDMEVGRVFP KRASPEPASP SSTTSSEDGS 180 PKPKRRRGGV DSDEAAQEFH LFQVDSFTFG NELLVEDMVL LSPSECSDIL SFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 3e-40 | ERF family protein |