PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8448865.1_g000001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 141aa    MW: 15416 Da    PI: 6.5383
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8448865.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-192272255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr+++ +g+++AeIrd    + + +r++lg+f taeeAa+a+++a+ +++g
  Rmu_co8448865.1_g000001.1 22 RYRGVRRRP-WGKFAAEIRDS---NrHGARVWLGTFNTAEEAARAYDRAAYAMRG 72
                               6********.**********4...3234*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MDEDHRGGKV QMGETKDAGE VRYRGVRRRP WGKFAAEIRD SNRHGARVWL GTFNTAEEAA  60
RAYDRAAYAM RGGLAILNFP NEYPSGTAVG GSSSSSSSAV SSSSSSSSSM QAGNQVLELE  120
YLDDRLLEEL LDCEDMKSKK K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.11e-25ERF family protein