PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_co8448729.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

CPP

Protein Properties

Length: 271aa MW: 30358.8 Da PI: 6.2395

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_co8448729.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	47	4.9e-15	95	133	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnC+k+kClk+YC+Cf+ag +C+ +C C++C+N+ e Rmu_co8448729.1_g000001.1 95 CKRCNCRKTKCLKLYCDCFSAGIYCDTTCACQECFNRPE 133 79**********************************876 PP
2	TCR	50.8	3.2e-16	172	210	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks ClkkYCeC++a++ Cs+ C+Ce+C+N Rmu_co8448729.1_g000001.1 172 RHKRGCNCKKSMCLKKYCECYQANVGCSNGCRCEGCQNA 210 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 271 aa Download sequence
MNSASINVRR CPNSLNVVEK DSAGGVDWRN ETETSVAASS ATTQSPHSVE FEHHGPIHEI 60 RISDSHSIDS YEECNQSSPN TKRKRALRNI DSDGCKRCNC RKTKCLKLYC DCFSAGIYCD 120 TTCACQECFN RPEYEDTVLE TRQKIESRNP LAFAPKVVER EDENQFTPAS ARHKRGCNCK 180 KSMCLKKYCE CYQANVGCSN GCRCEGCQNA YGKRGEFVDV DSSVSEEVIT DKDGTEIRES 240 TFDEKLQMVA TRKDSNDSPS LTPLTPSLQC F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	2e-60	CPP family protein