PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8442277.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 330aa MW: 35420.2 Da PI: 7.3272 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.4 | 3.4e-18 | 25 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEdell++++k+ G g+W+t +++ g+ R++k+c++rw +yl Rmu_co8442277.1_g000001.1 25 RGPWTPEEDELLANYIKKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYL 72 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 46.2 | 1.1e-14 | 83 | 123 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Rmu_co8442277.1_g000001.1 83 ADEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 123 79***************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
AAPKTAAVSS SSSKTPCCVK VGLKRGPWTP EEDELLANYI KKEGEGRWRT LPKRAGLLRC 60 GKSCRLRWMN YLRPSVKRGQ IAADEEDLIL RLHRLLGNRW SLIAGRIPGR TDNEIKNYWN 120 THLSKKLISQ GIDPRTHKPL NPDTSSADHA AVNNNGAAAS SSKTNQHRGG TSSNPSPKSP 180 ITSSSPEEAA PSARENGYHV TNDDDLGAIV HGANGYGNVM TSNDSNGSAA GMGGLRSNLL 240 IGNEEDEDMN CCTDDVFSSF LNSLINEDPF AAAAAGQHHS QPLQGMQHPN GIAPPADSSA 300 QAFGGWESAV LMSSSFIQND SHRVNVDQTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13540.1 | 7e-77 | MYB family protein |