PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8433201.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | bHLH | ||||||||
Protein Properties | Length: 175aa MW: 19584.2 Da PI: 10.1736 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.3 | 1.4e-08 | 79 | 119 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L Rmu_co8433201.1_g000001.1 79 ARQRRERISERIRVLQKLVPGG-----SKMDTASMLDEAANYLKFL 119 69******************95.....5****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
SDQKSTALST TNINFQQPTS SSLSGSSTDQ EPDPEVIAQM KEMIYRAAAF RPVNLGIEMV 60 ERPKRKNVKI SSDPQTVAAR QRRERISERI RVLQKLVPGG SKMDTASMLD EAANYLKFLR 120 SQVKALENLG QKIDSMSNCL PPTSFAFSFN PSFPMQTHHV PLHLNPNHNI HQPPN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 80 | 85 | RQRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21330.1 | 5e-55 | bHLH family protein |