PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8433021.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB | ||||||||
Protein Properties | Length: 181aa MW: 20997.6 Da PI: 9.3967 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.3 | 4.2e-14 | 17 | 64 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed +l+ +++++G +W+ ++ g+ R++k+c++rw +yl Rmu_co8433021.1_g000001.1 17 KGPWSPDEDHKLIAYIQRYGIWNWSQMPKPAGLARSGKSCRLRWMNYL 64 79******************99************************97 PP | |||||||
2 | Myb_DNA-binding | 54 | 3.9e-17 | 70 | 115 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e ++++ + +G++ W+ Ia++++ gRt++++k++w+++l Rmu_co8433021.1_g000001.1 70 RGNFSKEEEETIIKLQQNMGNR-WSVIAAKLP-GRTDNEIKNYWHTHL 115 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence |
MVRSSTQQCE EKRPLKKGPW SPDEDHKLIA YIQRYGIWNW SQMPKPAGLA RSGKSCRLRW 60 MNYLRPDIKR GNFSKEEEET IIKLQQNMGN RWSVIAAKLP GRTDNEIKNY WHTHLKRHLN 120 NDKAKSGENT SSETETFLLD KEAPKASETS RENFSSSSSG IADEVYHKPQ IPEQQSICET 180 F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31180.1 | 9e-56 | MYB family protein |