PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8430763.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ARR-B | ||||||||
Protein Properties | Length: 175aa MW: 19801.5 Da PI: 5.1417 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 80.6 | 1.8e-25 | 126 | 175 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQ Rmu_co8430763.1_g000001.1 126 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQ 175 79*******************.****************************9 PP | |||||||
2 | Myb_DNA-binding | 35.8 | 1.9e-11 | 128 | 175 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++q Rmu_co8430763.1_g000001.1 128 RVVWSVELHQQFVGAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQ 175 678*******************************************98 PP | |||||||
3 | Response_reg | 35.9 | 3.9e-13 | 1 | 56 | 53 | 109 |
CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 mp+mdG++ll++i e +lp+i+++a + ++ + + + Ga d+l Kp+ +e+l + Rmu_co8430763.1_g000001.1 1 MPDMDGFKLLEQIGLEM-DLPVIMMSADDGKSVVMKGVTHGACDYLIKPVRIEALKN 56 9************6654.8**********************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MPDMDGFKLL EQIGLEMDLP VIMMSADDGK SVVMKGVTHG ACDYLIKPVR IEALKNIWQH 60 VVRKKKNEWK DVEQSGSVDE GDRQQKPCEE PDYSSSANEG TWKNSKKRKD EDDDAEDRDD 120 TSTLKKPRVV WSVELHQQFV GAVNQLGIDK AVPKKILELM NVPGLTRENV ASHLQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 3e-80 | ARR-B family protein |