PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8418271.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 253aa MW: 28710 Da PI: 5.7602 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 56 | 1.4e-17 | 63 | 152 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +Y+ Y++ +GF vrk++ ++ g++t+r++vC kegkr+ + + +++ r++r+etr +C a + +k +g++ vt++++ Rmu_co8418271.1_g000001.1 63 WYRMYGTAIGFGVRKQRVTRG-IGGRVTRRRMVCCKEGKRDAKWLEkEDRVRNPRNETRENCLAACCFHYNKdSGTYFVTEFKT 145 79**************99997.9999**************99876635778899**********999999998*********** PP FAR1 84 eHnHela 90 eH+Hela Rmu_co8418271.1_g000001.1 146 EHSHELA 152 *****97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence |
MEESPVQETM EPDEEVEDSN SNINATTEGV SPSSLPEGEN FKELTADDVV GREFPTVEDA 60 ERWYRMYGTA IGFGVRKQRV TRGIGGRVTR RRMVCCKEGK RDAKWLEKED RVRNPRNETR 120 ENCLAACCFH YNKDSGTYFV TEFKTEHSHE LAKPKEIHFI RSNRCVSNAD LAHVNAMRSC 180 SISTSRAYDY IVNTSGGFEF VGYTSKDMFN KMDADRRAKR IDGDAQAAIA YMNAKAIEDP 240 GFMCKFSVDV DGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 8e-21 | FAR1 family protein |