PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8415911.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 235aa    MW: 26413.3 Da    PI: 6.0595
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8415911.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.93.9e-1691140355
                        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                ++GVr+++ +g+++A Irdp++ng  +r++lg++  ae+A  a+++a+ k++g
  Rmu_co8415911.1_g000001.1  91 FRGVRRRP-WGKYAADIRDPKKNG--TRVWLGTYERAEDAGLAYDRAAFKMRG 140
                                89******.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MSTETESFSN SNRALLESIR QHLLDDDFEF DTQSAFFANS PAQSTSSSSR IEISSNDLEI  60
VEEPNQVFTC KLEVEVAERE HNTPSRERQN FRGVRRRPWG KYAADIRDPK KNGTRVWLGT  120
YERAEDAGLA YDRAAFKMRG SKAKLNFPHL IGTHDMEVGR VLPKRASPEL SSPSSVDGSP  180
KPKRRRSGVD STAAKAKLGE AAQEFHVFQM DSFTFGDEDM VLLSPSECSD IRSFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-43ERF family protein