PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8389589.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 200aa    MW: 21519.4 Da    PI: 9.9079
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8389589.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.11.4e-31128185359
                                -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                D+y+WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+ +dp ++++tYegeH+h 
  Rmu_co8389589.1_g000001.1 128 DEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 185
                                9************************9888****************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MTLDFTRPNA LASNPKCTDI EFSVSSSSSF MSSAITGDNS VSNGKLGLFI APNPAPAVSG  60
AKPPLSAAPF KKRCHEHDRS DDVSCKLSGS GSASGSGKCH CSKRRKNRVK KTIRVPAISS  120
KIADIPPDEY SWRKYGQKPI KGSPYPRGYY KCSTVRGCPA RKHVERAPDD PAMLIVTYEG  180
EHRHAPDNMS GGVGMVFEST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.23e-69WRKY family protein