PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8385913.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family bHLH
Protein Properties Length: 174aa    MW: 18889.8 Da    PI: 5.1761
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8385913.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.21e-06130157535
                                HHHHHHHHHHHHHHHHHHHHCTSCCC...TT CS
                        HLH   5 hnerErrRRdriNsafeeLrellPkaskaps 35 
                                h   Er RR+++++ f++L  llP++   ps
  Rmu_co8385913.1_g000001.1 130 HIYTERERRKKMRNMFANLHALLPQL---PS 157
                                7778*********************7...43 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MSEREAGAGG SDGVLWENQS WVNLSNSTDN FLLNSNSENS AGGGDEGEDK LGEKEKEMME  60
REDRVQPEVE PVAAPGKKTL VKKRVGRGGA SGVKKHNGKA TKGKGIGSSD EVVEEGKGGD  120
GDSENDHELH IYTERERRKK MRNMFANLHA LLPQLPSKVN EAMLAFSFAY NGEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.13e-15bHLH family protein