PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8380525.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 150aa    MW: 16344 Da    PI: 6.5433
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8380525.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.61.7e-192073256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                               +y+GVr+++ +g+++AeIrd +  g   +r +lg+f taeeAa+a++ a+ +++g+
  Rmu_co8380525.1_g000001.1 20 KYRGVRRRP-WGKFAAEIRDSTRHG-EgARLWLGTFNTAEEAARAYDSAAFSMRGA 73
                               8********.**********43343.36*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MEGDSSRGSK AKQEGQKDVK YRGVRRRPWG KFAAEIRDST RHGEGARLWL GTFNTAEEAA  60
RAYDSAAFSM RGALAILNFP REHGLPDSSA ASAVSSPSSS SSSPTSISAS SSTLQNVEGT  120
TRTEPRREVF EIECLDDKVL EDLLDFDRKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.17e-27ERF family protein