PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8352885.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 329aa    MW: 37965.1 Da    PI: 8.4398
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8352885.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR162.71.1e-19110220190
                       FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................tekerrtraetrtgCka 64 
                                kfY+ Y++ vGFs+rk+k+  +k+++++++r++vCsk g++ + +k+                    +++  r r  +r+gC a
  Rmu_co8352885.1_g000001.1 110 KFYKYYSHVVGFSIRKAKKDLHKTKKTVYRRQWVCSKAGRHVSAQKStefgsaginegpngdnkkvpRNRLLRGRRISRCGCPA 193
                                6****************************************9999999*************99877767777799********* PP

                       FAR1  65 klkvkkek.dgkwevtkleleHnHela 90 
                                +l++  ++ ++ ++v+kl ++HnH+l+
  Rmu_co8352885.1_g000001.1 194 QLMIMWSTpQNLFYVSKLITQHNHDLV 220
                                *****9999***************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MDSMDEAGLR FSDYKYHMQV FSDEDEDAPL GFESDAGCVG EVSFPETMPP NKPIVAEAEM  60
EMNGCSQFKK VVRDLPAEYG NVELNGTNFK DITFDDVKHL WFRTIDEAEK FYKYYSHVVG  120
FSIRKAKKDL HKTKKTVYRR QWVCSKAGRH VSAQKSTEFG SAGINEGPNG DNKKVPRNRL  180
LRGRRISRCG CPAQLMIMWS TPQNLFYVSK LITQHNHDLV IAPEVHFLRS HRKVEGHDIA  240
QVESLLQAQV SISRAYEFLA YQAGGYHNMR FLLKDLYNKL RPKILKNGDE GDAEMAVRRM  300
KEKGSGEKEF WFEHTVDKDG RLANMYWRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-12FAR1 family protein