PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8328685.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 162aa    MW: 17461.9 Da    PI: 10.5919
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8328685.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.55e-2192142256
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                +y+GVr+++ +g+W+AeIrdp+    r +r++lg+f taeeAa+a+++a+ +++ge
  Rmu_co8328685.1_g000001.1  92 KYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFKTAEEAARAYDKAAIEFRGE 142
                                8********.**********82....48*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MSSHSGGLPK EQEHAIMVSA LKQVICGGGG RIASRSSGHS RPAVEGGSGT KKVVISISDG  60
DTCQVCRIDG CLGCEFFPPS KPDKGKRIKK GKYRGVRQRP WGKWAAEIRD PRRAARVWLG  120
TFKTAEEAAR AYDKAAIEFR GERAKLNFPL SSEAGTTSAA WT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-24ERF family protein