PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8315289.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | AP2 | ||||||||
Protein Properties | Length: 98aa MW: 11255.6 Da PI: 10.3537 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 24.8 | 5.3e-08 | 66 | 96 | 3 | 36 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkf 36 y+GV+++++ grW A+I + +k +lg+f Rmu_co8315289.1_g000001.1 66 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTF 96 9***************988532...5*******9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 98 aa Download sequence |
GYDKEEKAAR AYDLAALKYW GTSTTTNFPI SNYEKEVEEM KNCTRQEFVA SIRRKSSGFS 60 RGASMYRGVT RHHQHGRWQA RIGRVAGNKD LYLGTFSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 1e-64 | AP2 family protein |