PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8288283.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 189aa MW: 21352.6 Da PI: 5.9642 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.5 | 3.4e-10 | 2 | 29 | 31 | 59 |
T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 31 gCpvkkkversaedpkvveitYegeHnhe 59 +Cpvkkkvers ++++ei+Y+g+Hnh+ Rmu_co8288283.1_g000001.1 2 NCPVKKKVERSP-TGEITEIIYKGQHNHD 29 7***********.9**************7 PP | |||||||
2 | WRKY | 36.3 | 1.1e-11 | 144 | 165 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+vkg+++pr Rmu_co8288283.1_g000001.1 144 LDDGYRWRKYGQKVVKGNPHPR 165 59*******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
LNCPVKKKVE RSPTGEITEI IYKGQHNHDP PQPNKRAKDG GGQNGHMDSQ PKLENGLQRR 60 VGDSNRSSEA VPERDYEHAQ TAPVQLPSDS EDLGDAETRE EGDVDEPNPK RRNIDGVASE 120 VALPHKTVTE PKIIVQTRSE VDLLDDGYRW RKYGQKVVKG NPHPRWELSP YVYLLVFSFS 180 DLRVFNSEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03340.1 | 1e-46 | WRKY family protein |