PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8276569.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 193aa MW: 22054.8 Da PI: 7.0862 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63.1 | 7.8e-20 | 42 | 125 | 4 | 90 |
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 n+YA++ GFs+rk + +k +n+ +r+f Cskeg+ +e+ e ++ +r etrtgCka ++ + e +g+w+++ + +HnH Rmu_co8276569.1_g000001.1 42 NNYAYKKGFSIRKGHLRKDAQNN-PRQREFLCSKEGFLPDEDLC-EVKKVRRFETRTGCKAAFRFNVE-NGVWKISYTNPHHNH 122 89****************96666.9*************999988.899999****************9.*************** PP FAR1 88 ela 90 e+a Rmu_co8276569.1_g000001.1 123 EFA 125 *96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MDSGFQKKML ENGDEGYQFG DCEELKLGME VSSEAEAYEL CNNYAYKKGF SIRKGHLRKD 60 AQNNPRQREF LCSKEGFLPD EDLCEVKKVR RFETRTGCKA AFRFNVENGV WKISYTNPHH 120 NHEFASPEER KFLRSGRNIP SVRAAMVGYM VGESSTPVEA YPILEKECGS ADSVGFTHKD 180 YHSLLQSKKG EML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 4e-15 | FAR1 family protein |