PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8261837.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB
Protein Properties Length: 264aa    MW: 29581 Da    PI: 8.7172
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8261837.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.52.1e-15140747
                               HHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  7 eEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               eEd+ll ++v+++G ++W++I++ ++ gR++k+c++rw + 
  Rmu_co8261837.1_g000001.1  1 EEDDLLRKLVQRHGARNWTLISKSIP-GRSGKSCRLRWCNQ 40
                               9*************************.***********985 PP
2Myb_DNA-binding54.52.6e-174991347
                               SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               ++T+eEd +++ a+ ++G++ W+tIar ++ gRt++ +k++w++ 
  Rmu_co8261837.1_g000001.1 49 AFTAEEDNIIAAAHSKFGNK-WATIARLLN-GRTDNAIKNHWNST 91
                               79******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
EEDDLLRKLV QRHGARNWTL ISKSIPGRSG KSCRLRWCNQ LSPEVEHRAF TAEEDNIIAA  60
AHSKFGNKWA TIARLLNGRT DNAIKNHWNS TLKRKYSSMA EDGVFGGGGS IEEHHHHHHL  120
RPEKKSATVS VSGRGYSPTS PSGSDVSDSG VVPAVSSAQV FRPVARAVLR TESPSSQNEM  180
IHNEPEPSTL LTLSLPGGYS TELATRREER TTSLQQQQKE AENENRTMSF GPEFMSFMQE  240
MIRREVRNYM DDMNGQHFGI PKLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.12e-61MYB family protein