PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8238721.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TALE | ||||||||
Protein Properties | Length: 143aa MW: 16870.9 Da PI: 9.7439 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 26.2 | 1.4e-08 | 92 | 125 | 21 | 54 |
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Rmu_co8238721.1_g000001.1 92 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 125 469*****************************87 PP | |||||||
2 | ELK | 30.8 | 6.5e-11 | 46 | 67 | 1 | 22 |
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Rmu_co8238721.1_g000001.1 46 ELKHELKQGYKEKIVDIREEIL 67 9*******************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MSDDDEQFDS DINSYDASLD GHDTMGFGPL VPTESERSLM ERVRQELKHE LKQGYKEKIV 60 DIREEILRKR RAGKLPGDTT SVLKAWWQSH SKWPYPTEED KARLVQETGL QLKQINNWFI 120 NQRKRNWHSN LSTTSVLKSK RKR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 123 | 143 | RKRNWHSNLSTTSVLKSKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25220.2 | 4e-87 | TALE family protein |