PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8231061.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family AP2
Protein Properties Length: 108aa    MW: 11537.9 Da    PI: 10.7224
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8231061.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.31.6e-0774104129
                        AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krk 29 
                                s y+GV++++++gr++A+++d  ++n+ ++k
  Rmu_co8231061.1_g000001.1  74 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNK 104
                                57*******************6666665443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MASSSSDPGP KTESGSGSGG GAEASEAVAA AAAAVATDQQ LLYRGLKKAK KERGCTAKER  60
ISKMPPCAAG KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41710.12e-46AP2 family protein