PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8198010.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 143aa MW: 16196.8 Da PI: 7.5079 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.6e-19 | 16 | 68 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 s+y+G r+++ +gr++AeIrdp+ ng +r +lg+f+tae+Aa+a+++a+ +l+g+ Rmu_co8198010.1_g000001.1 16 SRYRGTRRRP-WGRYAAEIRDPTRNG--ARLWLGTFDTAEQAARAYDRAAFRLRGN 68 79********.**********98887..**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 143 aa Download sequence |
MEGKREENKP KARDQSRYRG TRRRPWGRYA AEIRDPTRNG ARLWLGTFDT AEQAARAYDR 60 AAFRLRGNLA ILNFPNEYQY HNSSTSSFVP SDSTSSSAAI SSAAADDNGK PFCKQESEVI 120 VFEYLDNMIL EELLAVKEDT HGN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 3e-17 | ERF family protein |