PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8161446.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 123aa MW: 13805.8 Da PI: 10.5403 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.1 | 1.4e-31 | 45 | 103 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D+++WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+++dp+++++tYe eH+h+ Rmu_co8161446.1_g000001.1 45 SDEFSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAQDDPTMLIVTYEAEHRHP 103 69*************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 123 aa Download sequence |
KRCHDELATK TTSSGRCHCS KRRKSKVKRT VRVPAISSKI ADIPSDEFSW RKYGQKPIKG 60 SPYPRGYYKC SSVRGCPARK HVERAQDDPT MLIVTYEAEH RHPHPQQSNS VPAGAVGLVF 120 QSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 5e-47 | WRKY family protein |