PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_co8161446.1_g000001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 123aa    MW: 13805.8 Da    PI: 10.5403
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_co8161446.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.11.4e-3145103259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +D+++WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+++dp+++++tYe eH+h+
  Rmu_co8161446.1_g000001.1  45 SDEFSWRKYGQKPIKGSPYPRGYYKCSSVrGCPARKHVERAQDDPTMLIVTYEAEHRHP 103
                                69*************************988****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
KRCHDELATK TTSSGRCHCS KRRKSKVKRT VRVPAISSKI ADIPSDEFSW RKYGQKPIKG  60
SPYPRGYYKC SSVRGCPARK HVERAQDDPT MLIVTYEAEH RHPHPQQSNS VPAGAVGLVF  120
QSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.15e-47WRKY family protein