PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8134984.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ZF-HD | ||||||||
Protein Properties | Length: 182aa MW: 19220.4 Da PI: 8.172 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 102.8 | 2.3e-32 | 103 | 160 | 2 | 60 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 ++vrY+eClkNhAa++Gg+++DGCgEfmp geegt +alkCaAC+CHRnFHR+ev+ e Rmu_co8134984.1_g000001.1 103 SNVRYRECLKNHAANIGGNVFDGCGEFMPC-GEEGTLEALKCAACDCHRNFHRKEVDGE 160 689**************************9.999*********************9865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MRTSGSALSY GATHLTKESS GGGEKRRLGN IHNGTPTALS AFTATHQTLD HHHPLQPHHV 60 QPVPLTTRDL DPDRVGSTAV APSGGVLSGG PKSKTPSSTS TTSNVRYREC LKNHAANIGG 120 NVFDGCGEFM PCGEEGTLEA LKCAACDCHR NFHRKEVDGE TTPFGPGSRS RSIMLSPLQL 180 PP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75240.1 | 1e-31 | ZF-HD family protein |