PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8131344.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | FAR1 | ||||||||
Protein Properties | Length: 157aa MW: 17864.6 Da PI: 4.4403 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 47.4 | 6.3e-15 | 86 | 135 | 1 | 50 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktek 50 +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+ +e++ k+++ Rmu_co8131344.1_g000001.1 86 NFYNAYAKHIGFSIRVNSYYRSKKDNSIISREFCCSKEGFCRERRAKNDS 135 6***************************************9999887222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MQVWTEHYVM EVEVSSEEVV DSYVSLEDEG YEHCVVEDVE VRVVLDDVKE DNGDIDLVQY 60 MAGGDNGGII EPTLDMEFDS EDDARNFYNA YAKHIGFSIR VNSYYRSKKD NSIISREFCC 120 SKEGFCRERR AKNDSSDGAK TRRARGLGPS LGKVSRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18960.1 | 5e-16 | FAR1 family protein |