PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8125528.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 83aa MW: 9847.05 Da PI: 11.5986 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.6 | 3.1e-18 | 17 | 67 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+G+r+++ +g+++AeIrdp+ ng r +lg+f+tae+Aa+a+++a+ ++g Rmu_co8125528.1_g000001.1 17 RYRGIRRRP-WGKYAAEIRDPTRNG--VRRWLGTFDTAEQAARAYDRAAFGFRG 67 59*******.**********98887..**********************98877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence |
MEGKREQSKP KVRDQFRYRG IRRRPWGKYA AEIRDPTRNG VRRWLGTFDT AEQAARAYDR 60 AAFGFRGRLA ILNFPNESQY HNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23230.1 | 1e-23 | ERF family protein |