PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8054398.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | MYB_related | ||||||||
Protein Properties | Length: 70aa MW: 8072.28 Da PI: 10.3907 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.7 | 1.3e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT eEd lv++v+++G+g+W+ ++ g+ R++k+c++rw +yl Rmu_co8054398.1_g000001.1 14 KGPWTSEEDVVLVNYVQEHGPGNWRNLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 70 aa Download sequence |
MGRAPCCDKN GLKKGPWTSE EDVVLVNYVQ EHGPGNWRNL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21440.1 | 6e-45 | MYB family protein |