PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8045116.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ERF | ||||||||
Protein Properties | Length: 167aa MW: 18816.2 Da PI: 8.6874 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.7e-19 | 57 | 116 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse..ng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+Wv+eIr+p+ g ++ r +lg+f+ta eAa a+++a+k+++g Rmu_co8045116.1_g000001.1 57 CSYRGVRQRI-WGKWVSEIRVPNAntHGltsRKvGRLWLGTFDTAVEAAHAYDKAAKAMYG 116 67*****998.**********8664555986558************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence |
MGKRPRVDET VVKWEKYSKN FDFAKDGLVN RMPRRMPTVG ARKGRMRGKG GPENLNCSYR 60 GVRQRIWGKW VSEIRVPNAN THGLTSRKVG RLWLGTFDTA VEAAHAYDKA AKAMYGPVAR 120 LNFPESLETS MSDETTESCD NASEFEDGVG EEPKQEDEVF DATVKEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 1e-23 | ERF family protein |