PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_co8007914.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | GeBP | ||||||||
Protein Properties | Length: 177aa MW: 18897.8 Da PI: 5.8951 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 70.1 | 4.4e-22 | 121 | 177 | 4 | 60 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirr 60 rlw e+Dei++L+G+idfkak+g +ps+++ af+ef+k+s++++vsk+ql++K rr Rmu_co8007914.1_g000001.1 121 GRLWGEDDEIAILKGMIDFKAKKGIDPSSNMGAFHEFLKRSLKADVSKNQLMDKTRR 177 69****************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
DNEEEENVNA KKPVVIPSSS VVPNPQSESA SSEDDDAAAG SETESDDINH SPSASDFTVK 60 PIVSKPVNDS SSAKPSKKPA PAPAKPAPGS KRPAESDPTP KDSRKKKKGA NGGDDEDTKK 120 GRLWGEDDEI AILKGMIDFK AKKGIDPSSN MGAFHEFLKR SLKADVSKNQ LMDKTRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 4e-17 | GeBP family protein |