PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_co7984152.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 115aa MW: 13210.2 Da PI: 10.9391 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 32.9 | 2.1e-10 | 4 | 59 | 38 | 90 |
FAR1 38 egkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +gk++ e+++ ++++ +r+ tr +C+a+++ ++ k +g+++v ++ +eHnH+la Rmu_co7984152.1_g000001.1 4 SGKKSGEDEHgkKRQRPPQRNITRGNCQARITARRCKeSGVFRVVQFITEHNHALA 59 56666655552233555599***************999****************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 115 aa Download sequence |
MKRSGKKSGE DEHGKKRQRP PQRNITRGNC QARITARRCK ESGVFRVVQF ITEHNHALAT 60 TEFVPFLRSH RKVRDHDVAQ VTELKKVSFG TCRAYELLVH QAGGHEFVGF LIKDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-10 | FAR1 family protein |