PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr7g0241041 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 142aa MW: 16327.8 Da PI: 6.6803 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.5 | 8.5e-31 | 23 | 81 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+++Hnh+ RcHm_v2.0_Chr7g0241041 23 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTNSHNHR 81 699***********************9988****************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence |
MIRPKTQASK RKVAHQKNEG PPSDFWSWRK YGQKPIKGSP YPRGYYRCST SKGCSAKKQV 60 ERSKTDASVL IITYTNSHNH RGPHVTSTTK NQSPPPKEAQ MQTNSEDDDH DLTAEVPKED 120 EPEPEPDQDE EQEQERKVDE YE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29280.1 | 6e-34 | WRKY family protein |