PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RcHm_v2.0_Chr7g0217321

Organism

Rosa chinensis

Taxonomic ID

74649

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 320aa MW: 35283.7 Da PI: 4.4694

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RcHm_v2.0_Chr7g0217321	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.1	1e-09	157	199	4	46
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +k+ rr +N+ AA +sR+R+k+++ Le k+k Le+e ++L RcHm_v2.0_Chr7g0217321 157 SKKRRRQLRNKDAAMKSRERRKMYVTDLEMKSKYLEGECRRLG 199 6999**********************************98764 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MEFDGGLEFL DSGVDVIGEI DWDFVFDDAK GLDLLQELEN PAATAATGAS PSSSSSSTVE 60 DAPANPEAGS IDTWIGEVED MLMKDEDVSK VEASEEPPKE YYENFLADVL VDSPSTESPA 120 YVDSNSNGCA KSEKEKTDGS PLNNDTDADA DADDPVSKKR RRQLRNKDAA MKSRERRKMY 180 VTDLEMKSKY LEGECRRLGR LLQCCYAENH ALRLSLQMGN AYGRGVSGTK QESAVLLELL 240 LLGSLLWFLD LTCLFTLPLM PHLLLLTLNQ EQANKALESV GPRARGEVSK VVLALQSQSF 300 VKTRRCKASR TKMKYAFLVS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	189	KRRRQLRNKDAAMKSRERRKMYVTDLEMKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	2e-13	bZIP family protein