PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RcHm_v2.0_Chr7g0215001
Organism
Rosa chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family BES1
Protein Properties Length: 668aa    MW: 75483.4 Da    PI: 6.8798
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RcHm_v2.0_Chr7g0215001genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822137.81.1e-42762083139
                  DUF822   3 sgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasas 89 
                             +gr++++kE+E++k+RER RR i+++++aGLR++Gn++lp+raD+n+Vl+AL+reAGwvve DGttyr+  +p+    ++g   s+s
  RcHm_v2.0_Chr7g0215001  76 GGRREREKEKERTKLRERLRRSITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVETDGTTYRQ--SPP----QIGGAYSMS 156
                             79******************************************************************4..455....344445555 PP

                  DUF822  90 pesslqsslkssalaspvesysaspksssfpspssldsislasa....asllpv 139
                               s    +++s  +a+   + s++ + ++++sp+slds+ + ++    ++++p+
  RcHm_v2.0_Chr7g0215001 157 LRSVE--TPVSGVKAALECHPSSVVRIDESLSPASLDSVVIGEKnekfSNSSPA 208
                             55442..35667778888888999999************999885555333333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 668 aa     Download sequence    
MEGLCLRTTT DATKRHERRE PPAGFGPPKR SELRLPPTSA PPPSPFPTPT PSPPTWLRRH  60
CRSRLGGPRL SLLHQGGRRE REKEKERTKL RERLRRSITS RMLAGLRQYG NFPLPARADM  120
NDVLAALARE AGWVVETDGT TYRQSPPQIG GAYSMSLRSV ETPVSGVKAA LECHPSSVVR  180
IDESLSPASL DSVVIGEKNE KFSNSSPAMN SVNCLETDQL MQHIPSAAGF APAPYVPLYV  240
TLATGFVNNY CQLVDPEGLR QELTHMQSLN ADGVVVDCWW GIVECWSPQK YDWSGYRGLF  300
NIVREFKLKL QVVMAFHEYG RSESGEALIP LPKWILDIGK ENQDIFFTDR EGRRNTECLS  360
WGVDKERVLH GRTGVEVYFD FMRSFRTEFD DLFGEGLISA VEIGLGASGE LKYPSFSERM  420
GWRYPGIGEF QCYDRYLQQS LHKAAKLRGH SFWARGPDNA GEYNSRPHET GFFCERGDYD  480
SYYGRFFLHW YAKTLIDHAD NVLSLASLAF DETKVIVKVP AVYWWYKTPS HAAELTSGYY  540
NPRNQDGYSP VFEVLKKHSV TVKFVCSAPN DGDEALGDPE GLSWQVLNLA WDRGLTVAGE  600
NALSCYDREG CMRIVEMVKP RNDPDRHHFT FFVYQQPSPL VQGTICFSEL DFFIKCMHGD  660
MAGNIVSC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45300.10.0BES1 family protein