PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RcHm_v2.0_Chr7g0195191 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WRKY | ||||||||
Protein Properties | Length: 359aa MW: 40745.1 Da PI: 5.3952 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.6 | 6.2e-29 | 135 | 195 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK++ g+++prsYYrCt++ +C+++k+v+rs+edp+++eitY+g+H+++ RcHm_v2.0_Chr7g0195191 135 EDGHSWRKYGQKDILGAKYPRSYYRCTFRntqNCWATKQVQRSDEDPTIFEITYKGKHTCS 195 8**************************998889**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence |
MDTASKSWEQ KSLVGEIIQG MELAQQLRLS LSAASTSSET REFLVQRILT SYEKALLLLQ 60 LSGTPQTSHV DAKSIVLQES RMSANTSPCG DDYNHRSFKD HQDLHEISKK RKIMAKWTDH 120 VIRVSSENGI EGPHEDGHSW RKYGQKDILG AKYPRSYYRC TFRNTQNCWA TKQVQRSDED 180 PTIFEITYKG KHTCSHGSTS VPPPPSPEQQ EQKRHKRENI SEPQQSQVNQ MSFPTNLRVD 240 TENLEDREMM ASPFAFTSTS FGCMMNGDDF LSPMFDNENF FSNFSQHLLS PATGESNYHL 300 APPSQMRNIA ANGQLSESDH TEIISATNSS TNSPIPDMDF PLDLVEFDPN FQFDTPELF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G11070.1 | 1e-53 | WRKY family protein |